PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14447
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 300aa    MW: 33785.7 Da    PI: 9.1426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14447genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.62.4e-2199148255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++G+r+++ +g+W+AeIrdp++     r++lg+f+t+eeAaka++aa++k++g
  PEQU_14447  99 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEEAAKAYDAAARKIRG 148
                 69*******.**********954...3*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-2399157IPR016177DNA-binding domain
SMARTSM003801.7E-3699162IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.8E-3399157IPR001471AP2/ERF domain
CDDcd000181.64E-2399158No hitNo description
PROSITE profilePS5103224.27699156IPR001471AP2/ERF domain
PfamPF008474.6E-14100148IPR001471AP2/ERF domain
PRINTSPR003676.1E-11100111IPR001471AP2/ERF domain
PRINTSPR003676.1E-11122138IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MCGGAIISDF ISTSSLRSSR VTANKLWPDR RRKSKGGRRI RAAVFDDDFE ADFQEFEDDP  60
EEEELENLFE VKPLVFRPKA SSFSRGPNDK SSKRKRKNQF RGIRQRPWGK WAAEIRDPRK  120
GERVWLGTFD TPEEAAKAYD AAARKIRGKK AKVNFPDDGP KIPQTHLPKM SSTKTCKPNS  180
SQEFCFNNSF GYSNNMNYNV YSSSGLEAKE QFKVDSAISS PLEPIINFRS EQESNSLNCS  240
GFGWERETNF PEITSIPPPI VEDIKSEFVE ETAAPMKKLK NNSGEAVSAD QAAAGRALSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-2099156563ATERF1
2gcc_A2e-2099156563ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934RRRKSK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917392.15e-85PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLI7EXJ58e-75I7EXJ5_MUSAC; ERF3
STRINGGSMUA_Achr8P23730_0014e-74(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.36e-38related to AP2 2